Molecule Tutorials - Herong's Tutorial Examples - v1.26, by Herong Yang
"load" and "delete" Commands on PyMol
This section provides a tutorial on how to load and delete molecule on PyMol using the 'load' and 'delete' commands.
You can use "load" and "delete" commands to load and delete molecule structure on PyMol.
For example, the following command loads a molecule structure from an SDF file:
PyMOL>load /Users/herong/Molecule-HY-001.sdf CmdLoad: loaded as "Molecule-HY-001".
If you want to delete all objects of the displayed molecule (including the molecule itself), you can use the following command:
PyMOL>delete all
Table of Contents
Molecule Names and Identifications
Nucleobase, Nucleoside, Nucleotide, DNA and RNA
Load Molecule from File into PyMol
Virtual Trackball Rotation on PyMol
►"load" and "delete" Commands on PyMol
"log_open" and "log_close" Commands on PyMol
Model Space and Camera Space on PyMol
"get_view" and "set_view" on PyMol
View Parameters Auto Adjusted on PyMol
Rotation with Transformation Matrix
Difference of "turn" and "rotate" Commands
Difference of "move" and "translate" Commands
"center", "zoom" and "reset" Commands
Model-to-Camera Space Coordinates Mapping
Camera-to-Model Space Coordinates Mapping
"show lines" Presentation Command
"show sticks" Presentation Command
"show spheres" Presentation Command
"show surface" Presentation Command
"show mesh" Presentation Command
ChEMBL Database - European Molecular Biology Laboratory
PubChem Database - National Library of Medicine
INSDC (International Nucleotide Sequence Database Collaboration)
HGNC (HUGO Gene Nomenclature Committee)