Molecule Tutorials - Herong's Tutorial Examples - v1.26, by Herong Yang
ChEMBL Data Resource - target
Provides a tutorial example on what are ChEMBL 'target' data resources and how to access them with REST API.
"target" is a primary data resource type provided by ChEMBL API. It represents a single biological target.
1. Get a list of all targets.
herong$ curl https://www.ebi.ac.uk/chembl/api/data/target <response> <targets> <target> <cross_references>...</cross_references> <organism>Homo sapiens</organism> <pref_name>Maltase-glucoamylase</pref_name> <species_group_flag/> <target_chembl_id>CHEMBL2074</target_chembl_id> ... </target> <target> ... </target> ... </targets> <page_meta> <limit>20</limit> <next>/chembl/api/data/target?limit=20&offset=20</next> <offset/> <previous/> <total_count>14347</total_count> </page_meta> </response>
2. Get the target of a given id.
herong$ curl https://www.ebi.ac.uk/chembl/api/data/target/CHEMBL2074 <target> <cross_references>...</cross_references> <organism>Homo sapiens</organism> <pref_name>Maltase-glucoamylase</pref_name> <species_group_flag/> <target_chembl_id>CHEMBL2074</target_chembl_id> <target_components>...</target_components> <target_type>SINGLE PROTEIN</target_type> <tax_id>9606</tax_id> </target> <target> <cross_references> <target> <xref_id>O60706</xref_id> <xref_name/> <xref_src>canSAR-Target</xref_src> </target> <target> <xref_id>ABCC9</xref_id> <xref_name/> <xref_src>Wikipedia</xref_src> </target> </cross_references> <organism>Homo sapiens</organism> <pref_name>Sulfonylurea receptor 2</pref_name> <species_group_flag/> <target_chembl_id>CHEMBL1971</target_chembl_id> <target_components>...</target_components> <target_type>SINGLE PROTEIN</target_type> <tax_id>9606</tax_id> </target>
Foreign keys to other resources: None.
Table of Contents
Molecule Names and Identifications
Nucleobase, Nucleoside, Nucleotide, DNA and RNA
►ChEMBL Database - European Molecular Biology Laboratory
Call ChEMBL Data Web Service Directly
ChEMBL Data Resource - molecule
ChEMBL Data Resource - activity
ChEMBL Data Resource - document
►ChEMBL Data Resource - target
ChEMBL Data Resource - chembl_id_lookup
chembl_webresource_client - Python Client
chembl_webresource_client - Usage Examples
chembl_webresource_client - RetryError Exception
PubChem Database - National Library of Medicine
INSDC (International Nucleotide Sequence Database Collaboration)
HGNC (HUGO Gene Nomenclature Committee)