Chemical Structure to SMILES Conversion

'StoneMIND Collector - Information Extraction System' tutorial was cited in a zhihu.com article in 2025.

The StoneMIND Collector - Information Extraction System tutorial was cited in a zhihu.com article in 2025.

Subject: 将化学结构转换为 SMILES 的常用方法
Date: 2025-09-29
Author: 费米子父​
Source: https://zhuanlan.zhihu.com/p/1956053833571599741

背景 SMILES(Simplified Molecular Input Line‑entry System)是一种用字符串编码
化学结构的线性表示,可以被多数化学信息学工具直接解析。与 mol 或 SDF 等基于结构坐标的
文件相比,SMILES 无需存储三维坐标,适合数据库索引和机器学习建模aatbio.com。要将已知
的分子结构转化为 SMILES,有多种可靠方法,以下总结几类常用途径。
...

StoneMIND Collector(Stonewise望石)
...
平台与界面:提供Windows和Mac本地客户端,以及网页版接口。
Windows客户端支持截屏选取任意2D分子图或IUPAC名称进行识别
(https://www.herongyang.com/Cheminformatics/OCSR-StoneMIND-Collector.html);
网页版支持上传图片或PDF批量识别。

Table of Contents

 About This Book

Reference Citations in 2025

 The Windows Forensics Journey - OriginalFileName

 Configure TLS on Independent Gateway

 Usage of Chinese Cryptography Standards

 Nichiren and The Opening of the Eyes

 rdMolDraw2D.MolDraw2DCairo produces Pre-condition Violation

 Using SAXParser to Validate XML Structure - XSD

 Abhay-Bhushan

 Computer Science Course (Character Encoding)

 Computer Science Course (Charactoer Encoding)

 Contribution to the Parallelization by Synchronized Threads

Chemical Structure to SMILES Conversion

 CS 6500: Network Security

 Introduction of Molecule SDF Format

 Chinese Character Encoding (gb2312/unicode/utf8)

 Sagittarius (constellation)

 Reference Citations in 2024

 Reference Citations in 2023

 Reference Citations in 2022

 Reference Citations in 2021

 Reference Citations in 2020

 Reference Citations in 2019

 Reference Citations in 2018

 Reference Citations in 2017

 Reference Citations in 2016

 Reference Citations in 2015

 Reference Citations in 2014

 Reference Citations in 2013

 Reference Citations in 2012

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 Reference Citations in 2010

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 Reference Citations in 2003

 Full Version in PDF/ePUB